Documentation¶
Package Components¶
The package Components contains both a data structure (SpatialImage
) and functionalities
dedicated to input/output operations (imread
, imsave
).
It consists in two modules : SpatialImage (see Module Spatial Image) and Input/Ouput (see Module Input/Output).
Module Spatial Image¶
Module Input/Output¶
Package Plugins¶
Tissue Image Toolkit (timagetk) can be used with or without the plug-in architecture provided by OpenAleaLab and implemented within the platform TissueLab. TissueLab will automatically detect the presence of Tissue Image Toolkit as plugins. Note that these plugins can be used independently of the TissueLab environment.
Tissue Image Toolkit is based on a set of X groups of plugins whose API (Application Programming Interface) are standardized, and these groups provide an access to a total of X methods. The groups of plugins are:
- Linear Filtering (9 methods, see Module Linear Filtering)
- Grayscale Morphology (12 methods, see Module Grayscale Morphology)
- Averaging (5 methods, see Module Averaging)
- H-transform (2 methods, see Module H-transform)
- Region Labeling (1 method, see Module Region Labeling)
- Segmentation (1 method, see Module Segmentation)
- Labels Post Processing (X methods, see Module Labels Post Processing)
- Registration (3 methods, see Module Registration)
- Sequence Registration (3 methods, see Module Sequence registration)