Documentation

Package Components

The package Components contains both a data structure (SpatialImage) and functionalities dedicated to input/output operations (imread, imsave).

It consists in two modules : SpatialImage (see Module Spatial Image) and Input/Ouput (see Module Input/Output).

Module Spatial Image

Module Input/Output

Package Plugins

Tissue Image Toolkit (timagetk) can be used with or without the plug-in architecture provided by OpenAleaLab and implemented within the platform TissueLab. TissueLab will automatically detect the presence of Tissue Image Toolkit as plugins. Note that these plugins can be used independently of the TissueLab environment.

Tissue Image Toolkit is based on a set of X groups of plugins whose API (Application Programming Interface) are standardized, and these groups provide an access to a total of X methods. The groups of plugins are:

Module Linear Filtering

Module Grayscale Morphology

Module Averaging

Module H-transform

Module Region Labeling

Module Segmentation

Module Labels Post Processing

Module Registration

Module Sequence registration